Early scans are usually quite accurate.
Maybe I'm misunderstanding your post but if bubs was showing as 5w 4d on Saturday then that means you would take two weeks off that (as they include the two weeks prior to O when calculating due date) to get an estimation of when you conceived which would mean your O date was actually around Sept 16th.
Taking two weeks off again would give you a rough LMP date of 2nd September (although yours could've been different, that's how they work it out).
That would give you a due date of 9th June. That means today you are 5weeks 6 days pregnant which matches exactly what the scan said on Sat.
Remember that sperm can last for several days so you may have DTD several days before 16tth Sept which then resulted in this pregnancy.
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