Our DS didn't like being swaddled - at least that is what we thought. We had two issues though:
1. We were not wrapping firmly enough - we now use a cot sheet & wrap him nice & firm & I believe it helps him sleep and stay asleep. His hands are up front so he can suck on them since they are his favourite toy right now (he is 11 weeks young).

2. I thought he was crying because I was wrapping him but he was actually crying because he was tired. Most things I have read say you have 5 mins between first tired sign & over tired. Hmmmmmmmmm either I miss the tired signs (highly likely...they are very subtle in DS) or he gives me about 1 minutes notice from tired signs & screaming over tired.

I am not saying you are no good at wrapping (that was me & DH) or that you are missing babies tired signs; that was just our experience.

DS is snug as a bug right now having a lovely sleep!